RNA Analyzer3

Webserver for RNA Sequence Overview

Examples to test


>MYC, mRNA

AACTCGCTGTAGTAATTCCAGCGAGAGGCAGAGGGAGCGAGCGGGCGGCCGGCTAGGGTGGAAGAGCCGGGCGAGCAGAGCTGCGCTGCGGGCGTCCTGGGAAGGGAGATCCGGAGCGAATAGGGGGCTTCGCCTCTGGCCCAGCCCTCCCGCTGATCCCCCAGCCAGCGGTCCGCAACCCTTGCCGCATCCACGAAACTTTGCCCATAGCAGCGGGCGGGCACTTTGCACTGGAACTTACAACACCCGAGCAAGGACGCGACTCTCCCGACGCGGGGAGGCTATTCTGCCCATTTGGGGACACTTCCCCGCCGCTGCCAGGACCCGCTTCTCTGAAAGGCTCTCCTTGCAGCTGCTTAGACGCTGGATTTTTTTCGGGTAGTGGAAAACCAGCAGCCTCCCGCGACGATGCCCCTCAACGTTAGCTTCACCAACAGGAACTATGACCTCGACTACGACTCGGTGCAGCCGTATTTCTACTGCGACGAGGAGGAGAACTTCTACCAGCAGCAGCAGCAGAGCGAGCTGCAGCCCCCGGCGCCCAGCGAGGATATCTGGAAGAAATTCGAGCTGCTGCCCACCCCGCCCCTGTCCCCTAGCCGCCGCTCCGGGCTCTGCTCGCCCTCCTACGTTGCGGTCACACCCTTCTCCCTTCGGGGAGACAACGACGGCGGTGGCGGGAGCTTCTCCACGGCCGACCAGCTGGAGATGGTGACCGAGCTGCTGGGAGGAGACATGGTGAACCAGAGTTTCATCTGCGACCCGGACGACGAGACCTTCATCAAAAACATCATCATCCAGGACTGTATGTGGAGCGGCTTCTCGGCCGCCGCCAAGCTCGTCTCAGAGAAGCTGGCCTCCTACCAGGCTGCGCGCAAAGACAGCGGCAGCCCGAACCCCGCCCGCGGCCACAGCGTCTGCTCCACCTCCAGCTTGTACCTGCAGGATCTGAGCGCCGCCGCCTCAGAGTGCATCGACCCCTCGGTGGTCTTCCCCTACCCTCTCAACGACAGCAGCTCGCCCAAGTCCTGCGCCTCGCAAGACTCCAGCGCCTTCTCTCCGTCCTCGGATTCTCTGCTCTCCTCGACGGAGTCCTCCCCGCAGGGCAGCCCCGAGCCCCTGGTGCTCCATGAGGAGACACCGCCCACCACCAGCAGCGACTCTGAGGAGGAACAAGAAGATGAGGAAGAAATCGATGTTGTTTCTGTGGAAAAGAGGCAGGCTCCTGGCAAAAGGTCAGAGTCTGGATCACCTTCTGCTGGAGGCCACAGCAAACCTCCTCACAGCCCACTGGTCCTCAAGAGGTGCCACGTCTCCACACATCAGCACAACTACGCAGCGCCTCCCTCCACTCGGAAGGACTATCCTGCTGCCAAGAGGGTCAAGTTGGACAGTGTCAGAGTCCTGAGACAGATCAGCAACAACCGAAAATGCACCAGCCCCAGGTCCTCGGACACCGAGGAGAATGTCAAGAGGCGAACACACAACGTCTTGGAGCGCCAGAGGAGGAACGAGCTAAAACGGAGCTTTTTTGCCCTGCGTGACCAGATCCCGGAGTTGGAAAACAATGAAAAGGCCCCCAAGGTAGTTATCCTTAAAAAAGCCACAGCATACATCCTGTCCGTCCAAGCAGAGGAGCAAAAGCTCATTTCTGAAGAGGACTTGTTGCGGAAACGACGAGAACAGTTGAAACACAAACTTGAACAGCTACGGAACTCTTGTGCGTAAGGAAAAGTAAGGAAAACGATTCCTTCTAACAGAAATGTCCTGAGCAATCACCTATGAACTTGTTTCAAATGCATGATCAAATGCAACCTCACAACCTTGGCTGAGTCTTGAGACTGAAAGATTTAGCCATAATGTAAACTGCCTCAAATTGGACTTTGGGCATAAAAGAACTTTTTTATGCTTACCATCTTTTTTTTTTCTTTAACAGATTTGTATTTAAGAATTGTTTTTAAAAAATTTTAAGATTTACACAATGTTTCTCTGTAAATATTGCCATTAAATGTAAATAACTTTAATAAAACGTTTATAGCAGTTACACAGAATTTCAATCCTAGTATATAGTACCTAGTATTATAGGTACTATAAACCCTAATTTTTTTTATTTAAGTACATTTTGCTTTTTAAAGTTGATTTTTTTCTATTGTTTTTAGAAAAAATAAAATAACTGGCAAATATATCATTGAGCCAAATCTTAAGTTGTGAATGTTTTGTTTCGTTTCTTCCCCCTCCCAACCACCACCATCCCTGTTTGTTTTCATCAATTGCCCCTTCAGAGGGTGGTCTTAAGAAAGGCAAGAGTTTTCCTCTGTTGAAATGGGTCTGGGGGCCTTAAGGTCTTTAAGTTCTTGGAGGTTCTAAGATGCTTCCTGGAGACTATGATAACAGCCAGAGTTGACAGTTAGAAGGAATGGCAGAAGGCAGGTGAGAAGGTGAGAGGTAGGCAAAGGAGATACAAGAGGTCAAAGGTAGCAGTTAAGTACACAAAGAGGCATAAGGACTGGGGAGTTGGGAGGAAGGTGAGGAAGAAACTCCTGTTACTTTAGTTAACCAGTGCCAGTCCCCTGCTCACTCCAAACCCAGGAATTCTGCCCAGTTGATGGGGACACGGTGGGAACCAGCTTCTGCTGCCTTCACAACCAGGCGCCAGTCCTGTCCATGGGTTATCTCGCAAACCCCAGAGGATCTCTGGGAGGAATGCTACTATTAACCCTATTTCACAAACAAGGAAATAGAAGAGCTCAAAGAGGTTATGTAACTTATCTGTAGCCACGCAGATAATACAAAGCAGCAATCTGGACCCATTCTGTTCAAAACACTTAACCCTTCGCTATCATGCCTTGGTTCATCTGGGTCTAATGTGCTGAGATCAAGAAGGTTTAGGACCTAATGGACAGACTCAAGTCATAACAATGCTAAGCTCTATTTGTGTCCCAAGCACTCCTAAGCATTTTATCCCTAACTCTACATCAACCCCATGAAGGAGATACTGTTGATTTCCCCATATTAGAAGTAGAGAGGGAAGCTGAGGCACACAAAGACTCATCCACATGCCCAAGATTCACTGATAGGGAAAAGTGGAAGCGAGATTTGAACCCAGGCTGTTTACTCCTAACCTGTCCAAGCCACCTCTCAGACGACGGTAGGAATCAGCTGGCTGCTTGTGAGTACAGGAGTTACAGTCCAGTGGGTTATGTTTTTTAAGTCTCAACATCTAAGCCTGGTCAGGCATCAGTTCCCCTTTTTTTGTGATTTATTTTGTTTTTATTTTGTTGTTCATTGTTTAATTTTTCCTTTTACAATGAGAAGGTCACCATCTTGACTCCTACCTTAGCCATTTGTTGAATCAGACTCATGACGGCTCCTGGGAAGAAGCCAGTTCAGATCATAAAATAAAACATATTTATTCTTTGTCATGGGAGTCATTATTTTAGAAACTACAAACTCTCCTTGCTTCCATCCTTTTTTACATACTCATGACACATGCTCATCCTGAGTCCTTGAAAAGGTATTTTTGAACATGTGTATTAATTATAAGCCTCTGAAAACCTATGGCCCAAACCAGAAATGATGTTGATTATATAGGTAAATGAAGGATGCTATTGCTGTTCTAATTACCTCATTGTCTCAGTCTCAAAGTAGGTCTTCAGCTCCCTGTACTTTGGGATTTTAATCTACCACCACCCATAAATCAATAAATAATTACTTTCTTTGA


>cathepsin

cttgctttgctggagtattctggtaatttgatgggttgagggttctggacacaatgccccaagccccttccttgttgtgctgggttcctatttctgctctcggcactgacttagcagctgctcaagagctcactatgttggcttggattacacggtctcacccacatctccggcagtttgtgggcaaacctcctgagcagccttgggtgatgaaacctttcatggtagcaggagaatgggactgtgaattctcaatcccctgtccccaccccttccttcctctctcagggccttaaagtctaggaggaggaagcacagcagcaactgactgggcagcctttcaggaaagatgcagccactcctgcttctgctggcctttctcctacccactggggctgaggcaggtgagtgaccatccccaccctcagaggcctgacctcatcccatagattcttgagccaaattgccttggtatatcctaattctgtactgttgagcaagttatttgaatttgtgtttcctcatctataaaatgagaataatattaataccgatcttgcagagttgccatgagagttaaataagttagagtatttaaatgtcttggaattgcccgcacactataagtgctataaaaacatgctttgtgtaaataatttggcagcatgtgtcagaccctacctaggaggtaagaatacagcaataacagtaccatcagctcatgtctagatttttaaacaccagtcccacgtggtcttgaattggactcagagggctctgggaagctccatgaggataaaagtataagggaacttcaggaacaatcctgtacttacagcaaagcattctcctcaatacctgaggctgaagctggccttgcctggaacaagggttgttctccctcttttggagaggaggagggaggtgaggcctaggatggggaaaagggctcctttcaaacagcagtgtttcctgtagaaccctggagccccctcccaatctgctgccccatagactcaagcctcagcaccatctcctccctctcctgcaccctctctcctgccgtccccatcttccagcctttctggagccaccaatctggtacccacattgcaggttcagcaagcatagagctaagtgccaaatgcttccttccaggggagatcatcggaggccgggagagcaggccccactcccgcccctacatggcgtatcttcagatccagagtccagcaggtcagagcagatgtggagggttcctggtgcgagaagactttgtgctgacagcagctcattgctggggaaggtgaggagctaaggaacttcctggccagccaggaacacagccctgcggagctcttcggtggaagagccatctgaaagaagagttgtagcaatgaaagggtgaaagaaagaccaagtgagtctttgcgggagggaacaggccagtgtaaatgaggaggaaaggaggataagatcaaaaagagcaagaggaagagatggaagacacatattggggctcaaaatataaactcaggctatttatcaacttaatctggggaagtaaacctgaaggcaagtaccaccctgtcatccctagctcagagctgctgagaaagaggatacagctgagccccagggccctcccatcccctcgattctggttagctgcagtcttgccctccccgtgctgtctgcctaccctgcagagctggtggaccatagctcctgcagcccagacctacctcttgcttttgcagcaatataaatgtcaccctgggcgcccacaatatccagagacgggaaaacacccagcaacacatcactgcgcgcagagccatccgccaccctcaatataatcagcggaccatccagaatgacatcatgttattgcaggtaccacctacctggccctctggctccttcctagtgtgtccggggacaatggaggaggaagtgagggcaaggctccggggtggcggggagggcatgggatgtgtactgcaccagcgacccccgagccttggctggaggccccagctgagcgggaacgcctacattcttcctccagctgagcagaagagtcagacggaatcgaaacgtgaacccagtggctctgcctagagcccaggagggactgagacccgggacgctgtgcactgtggccggctggggcagggtcagcatgaggaggggaacagatacactccgagaggtgcagctgagagtgcagagggataggcagtgcctccgcatcttcggttcctacgacccccgaaggcagatttgtgtgggggaccggcgggaacggaaggctgccttcaaggtaaggcatgggcattggccaacacaccccgggagagaggggcccgtgcagagccaggcagtgcgaacagattccatccccacagcctcagcctggcagccagaccagggtgggctggggattgttttccccatcaacctggtctctgggggaataggaggaagacccacaacacatacataggcaacattctcctggagaagggagaggtaccttgactcagattgggctggagacagtaattaaggcagagctgaagtccagcgaccgaaaagatccagaggcttggctcctgtaccccaccgatcttccatctcacacacacccagcaattgaaggggcccacccacccctgccttccctgagagcccggagctcagggaagcaggagcagggaggcctgtctcagtctcccttctcctctctacctacagggggattccggaggccccctgctgtgtaacaatgtggcccacggcatcgtctcctatggaaagtcgtcaggggttcctccagaagtcttcaccagggtctcaagtttcctgccctggataaggacaacaatgagaagcttcaaactgctggatcagatggagacccccctgtgactgactcttcttctcggggacacaggccagctccacagtgttgccagagccttaataaacgtccacagagtataaataaccaattcctcatttgttcattaaacgtcattcagtacttagtttgtttggattgctacaacaaaatagcacaaattgggtggcttataaataacaaatttatttctcacaggtctagaggctaagaagtctaagatcaagtcactagcagattcagtgtctaattagggcccattttctggttcacagacaaccatcctctccctgtgtccacatatggcaaaaggggcaagggaattctctgatgtctcttttacaagggacctagtctcattcaaagagctcagcttttacgacctaatcacatcccaaaggccccacctaatgccatcacgacattggggattaggtctgggaaacatagggaaagagtgtctctacacaaaaattttaaaattagccaggcatggtggcatgtgtctatagtcccagctacttgggaggctaaagtggaaggattagttgaacccacgaggttgaggcttcagtgaaccatgcactccagcctgagcgacagagcaagacaccattccaagaaagaaaaaaaaaaagactggcaggccaaaaagacagaactgaaattccaaaaaaaaagacctactttagtgtatgaaaaaggtggcatctcaaatcactgggaaacaatggaatttttgaataaatagcattagaaccaacctagatagatatttggaggggatggaag


>ire

gagcagcgccttggaggtcccgtggatctgtgtcttgcttcaacagtgtttgaacggaacagacccggggattcccactgtactcgcttccagccgcctttacaagtctctccagtcgcagcctccgggaccatctcctcgctgccttcagctcctaggaccagtctgcaccgtctcttcgcggttagctcctactccggatcagccatgacctctcagattcgtcagaattattccaccgaggtggaagctgccgtgaaccgcctggtcaacttgcacctgcgggcctcctacacctacctctctctgggcttcttttttgatcgggatgacgtggctctggagggcgtaggccactt


>ferritin heavy chain 1 (FTH1), mRNA

GCCAGACGTTCTTCGCCGAGAGTCGTCGGGGTTTCCTGCTTCAACAGTGCTTGGACGGAACCCGGCGCTCGTTCCCCACCCCGGCCGGCCGCCCATAGCCAGCCCTCCGTCACCTCTTCACCGCACCCTCGGACTGCCCCAAGGCCCCCGCCGCCGCTCCAGCGCCGCGCAGCCACCGCCGCCGCCGCCGCCTCTCCTTAGTCGCCGCCATGACGACCGCGTCCACCTCGCAGGTGCGCCAGAACTACCACCAGGACTCAGAGGCCGCCATCAACCGCCAGATCAACCTGGAGCTCTACGCCTCCTACGTTTACCTGTCCATGTCTTACTACTTTGACCGCGATGATGTGGCTTTGAAGAACTTTGCCAAATACTTTCTTCACCAATCTCATGAGGAGAGGGAACATGCTGAGAAACTGATGAAGCTGCAGAACCAACGAGGTGGCCGAATCTTCCTTCAGGATATCAAGAAACCAGACTGTGATGACTGGGAGAGCGGGCTGAATGCAATGGAGTGTGCATTACATTTGGAAAAAAATGTGAATCAGTCACTACTGGAACTGCACAAACTGGCCACTGACAAAAATGACCCCCATTTGTGTGACTTCATTGAGACACATTACCTGAATGAGCAGGTGAAAGCCATCAAAGAATTGGGTGACCACGTGACCAACTTGCGCAAGATGGGAGCGCCCGAATCTGGCTTGGCGGAATATCTCTTTGACAAGCACACCCTGGGAGACAGTGATAATGAAAGCTAAGCCTCGGGCTAATTTCCCCATAGCCGTGGGGTGACTTCCCTGGTCACCAAGGCAGTGCATGCATGTTGGGGTTTCCTTTACCTTTTCTATAAGTTGTACCAAAACATCCACTTAAGTTCTTTGATTTGTACCATTCCTTCAAATAAAGAAATTTGGTACCCAGGTGTTGTCTTTGAGGTCTTGGGATGAATCAGAAATCTATCCAGGCTATCTTCCAGATTCCTTAAGTGCCGTTGTTCAGTTCTAATCACACTAATCAAAAAGAAACGAGTATTTGTATTTATTAAACTCATTAGTTTGGGCAGTATACTAAGGTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCGACTCTGAATCCAGAGTCTGAGTTAAATGTTTCCAATGGTTCAGTCTAGCTTTCACAGTTTTTATGAATAAAAGGCATTAAAGGCTGAA


>trna

gatcacacacaaaagaagagcccaggaactcgttcaccaccttgcaccttgcctgttagttcacggcataatggtaacagagtcttcattaatggaagcaacgttactaccgtgagcccggatagctcagtcggtagagcatcagacttttaatctgagggtccagggttcaagtccctgttcgggcggtatcttttttttcctcattaaaagagtaagaaccaattttaggatcttttgtttgttaacacactgcaaaagaagggaataaagtcctggattgtgtaaactgcgaccccaaacacttctcggagggtaagccctctatggggataggcctttgtgcagaggtatacgggaaacttctaatccatcactttgggggctgtaataggcagattatctgtagccaccagccgg


>stemgg

aaaaaaaaaaaaaaaaaaaagaaaaaaaaaaccccccuuuuuuuuuuguuuuuuuuuuuuuuuuuuuu


>riboswitch

GGAUACGAAUGUCAAAUAGGUGCCGGUCCGUGAACAACAGCCGGCUUAAAAGGGAAACCGGUAAAAGCCGGUGCGGUCCCGCCACUGUAAUUGGCCAAGCGCCAAGAGCCAGGAUACCUGCCUGUUUGAUCAGCACGAA


>transcelegans

aacuaaaacaauuuuugaagaacaguuucuguacuucauugguauguagagacuuccagaaccuaguucugaaauuuuggaccgagcuuucgggcuuuuuuuuuacuuuuuucggguacggcgcgggugugggggggccugugggggguccuaugggggccuauggggggcccagggggggucccgggggggccggccgggcgcccaccccgcccccggcgacccgagcggcgcacgaaaaacgcgaaacgcgugcuuggcgugacucgcgcggcccgugcgcgugcguggugacaaucggcgcgugcugaaugcgacggugcgcgagauguggcggugcggagggucggcccgcgcuuuuuuugaccuccuccaaaaaagccuauaguccgcgcaagagggcggcgcuuuggggacgcgggcuggcccccgugcgccggcccccgcgcgcaggcccgcccccgacccugccccgcccugccccgcccugcccgcgccccggcccucaccccacgccacgccaccccguaucaucgauagacccccgcgcggguacauuucgcgccaaacggguuagagacucuu


>transschisotosma

auguaguguugaggagcgauugguguuguguuuguuguugucgaguggugguuguguugacggagaugauuaauuugcaaauggaugagugggagugagguguuguuuugugguaggguugguggacugugaguuggucgggcuaaccgucacgguuuuacucuugugauuuguugcaugguaagaaccgucgaccaagaaucgaaguuuucuuuggcagcccuacacacggggcuaauaucaguugcacaacagaaugguggucggauguguugggugcaagacgccugaucacaaacaccaaucgaaucgugauaagucugcaacacacaaucaaacaaacacagauccacucacagucagucaggcauucaguuacucagucagucaaucgcucacucacacgguugauucaguguguuucacaauggguuucgugugaaugaggcuaguugacguuacuugucuacugauaaaucgugguugugaguaguguguguagugcagugguuauuguugagaucgguguuagugucugguguauugugguuucucagugguugucaguaggcguguauacauggaguaguguuga