Licenses & Attributions
RNAanalyzer3 is a free to use webserver open to all users for RNA sequence analysis without login requirements. This webserver integrates several third-party bioinformatics tools and databases. The license information for the integrated tools are given below.
| Tool / Database | License | Reference / Link | Citation |
|---|---|---|---|
| AUGUSTUS | Artistic License | Website | Stanke et al., Nucleic Acids Res 2008 |
| CPC2 | GPL-3.0 | GitHub | Kang et al., Nucleic Acids Res 2017 |
| Infernal | BSD-3-Clause | Website | Nawrocki & Eddy, Bioinformatics 2013 |
| HMMER | BSD-3-Clause | Website | Eddy, PLoS Comput Biol 2011 |
| miRanda | GPL | Website | John et al., PLoS Biol 2004 |
| ViennaRNA Package | Custom free academic license | Website | Lorenz et al., Algorithms Mol Biol 2011 |
| VARNA | GPL-3.0 | Website | Darty et al., Bioinformatics 2009 |
| IPknot | GPL-3.0 | Website | Sato et al., Bioinformatics 2011 |
| tRNAscan-SE | GPL-3.0 | GitHub | Chan & Lowe, Nucleic Acids Res 2019 |
| YAMTK | GPL-3.0 | Github | - |
Notes:
- License texts are included in the RNAanalyzer3 GitHub repository.
- Please cite the relevant publications when using this web server in your research.